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Science 299 (5607): 708-710

Copyright © 2003 by the American Association for the Advancement of Science

PDGFRA Activating Mutations in Gastrointestinal Stromal Tumors

Michael C. Heinrich,1* Christopher L. Corless,2 Anette Duensing,3 Laura McGreevey,1 Chang-Jie Chen,3 Nora Joseph,3 Samuel Singer,4 Diana J. Griffith,1 Andrea Haley,1 Ajia Town,1 George D. Demetri,5 Christopher D. M. Fletcher,3 Jonathan A. Fletcher35*

Most gastrointestinal stromal tumors (GISTs) have activating mutations in the KIT receptor tyrosine kinase, and most patients with GISTs respond well to Gleevec, which inhibits KIT kinase activity. Here we show that ~35% (14 of 40) of GISTs lacking KIT mutations have intragenic activation mutations in the related receptor tyrosine kinase, platelet-derived growth factor receptor alpha  (PDGFRA). Tumors expressing KIT or PDGFRA oncoproteins were indistinguishable with respect to activation of downstream signaling intermediates and cytogenetic changes associated with tumor progression. Thus, KIT and PDGFRA mutations appear to be alternative and mutually exclusive oncogenic mechanisms in GISTs.

1 Department of Medicine,
2 Department of Pathology, Oregon Health & Science University Cancer Institute and Portland VA Medical Center, Portland, OR 97201, USA.
3 Department of Pathology, Brigham and Women's Hospital, 75 Francis Street, Boston, MA 02115, USA, and Harvard Medical School, Boston, MA 02115, USA.
4 Department of Surgery, Memorial Sloan-Kettering Cancer Institute, New York, NY 10021, USA.
5 Department of Medical Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA 02115, USA.
*   To whom correspondence should be addressed. E-mail: heinrich{at}ohsu.edu, jfletcher{at}partners.org



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Cancer Res. 66, 283-289
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Dasatinib (BMS-354825), a Dual SRC/ABL Kinase Inhibitor, Inhibits the Kinase Activity of Wild-Type, Juxtamembrane, and Activation Loop Mutant KIT Isoforms Associated with Human Malignancies.
M. M. Schittenhelm, S. Shiraga, A. Schroeder, A. S. Corbin, D. Griffith, F. Y. Lee, C. Bokemeyer, M. W.N. Deininger, B. J. Druker, and M. C. Heinrich (2006)
Cancer Res. 66, 473-481
   Abstract »    Full Text »    PDF »
Patterns of Progression in Gastrointestinal Stromal Tumor Treated with Imatinib Mesylate.
M.-H. Ryu, J.-L. Lee, H. M. Chang, T. W. Kim, H. J. Kang, H. J. Sohn, J. S. Lee, and Y.-K. Kang (2006)
Jpn. J. Clin. Oncol. 36, 17-24
   Abstract »    Full Text »    PDF »
Management of Gastrointestinal Stromal Tumors in the Imatinib Era: Selected Case Studies.
R. S. Benjamin, C. D. Blanke, J.-Y. Blay, S. Bonvalot, and B. Eisenberg (2006)
Oncologist 11, 9-20
   Abstract »    Full Text »    PDF »
Cytogenetic Confirmation of a Gastrointestinal Stromal Tumor and Ewing Sarcoma/Primitive Neuroectodermal Tumor in a Single Patient.
S. Kondo, U. Yamaguchi, S. Sakurai, Y. Ikezawa, H. Chuman, U. Tateishi, K. Furuta, and T. Hasegawa (2005)
Jpn. J. Clin. Oncol. 35, 753-756
   Abstract »    Full Text »    PDF »
Sequence survey of receptor tyrosine kinases reveals mutations in glioblastomas.
V. Rand, J. Huang, T. Stockwell, S. Ferriera, O. Buzko, S. Levy, D. Busam, K. Li, J. B. Edwards, C. Eberhart, et al. (2005)
PNAS 102, 14344-14349
   Abstract »    Full Text »    PDF »
Prognostic Role of E2F1 and Members of the CDKN2A Network in Gastrointestinal Stromal Tumors.
F. Haller, B. Gunawan, A. von Heydebreck, S. Schwager, H.-J. Schulten, J. Wolf-Salgo, C. Langer, G. Ramadori, H. Sultmann, and L. Fuzesi (2005)
Clin. Cancer Res. 11, 6589-6597
   Abstract »    Full Text »    PDF »
Deletions Affecting Codons 557-558 of the c-KIT Gene Indicate a Poor Prognosis in Patients With Completely Resected Gastrointestinal Stromal Tumors: A Study by the Spanish Group for Sarcoma Research (GEIS).
J. Martin, A. Poveda, A. Llombart-Bosch, R. Ramos, J. A. Lopez-Guerrero, J. G. del Muro, J. Maurel, S. Calabuig, A. Gutierrez, J. L. G. de Sande, et al. (2005)
J. Clin. Oncol. 23, 6190-6198
   Abstract »    Full Text »    PDF »
The value of c-kit mutational analysis in a cytokeratin positive gastrointestinal stromal tumour.
G Rossi, G Sartori, R Valli, F Bertolini, N Bigiani, L Schirosi, A Cavazza, and G Luppi (2005)
J. Clin. Pathol. 58, 991-993
   Abstract »    Full Text »    PDF »
Soft-Tissue Sarcomas in Adults.
M. A. Clark, C. Fisher, I. Judson, and J. M. Thomas (2005)
N. Engl. J. Med. 353, 701-711
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PDGFRA Mutations in Gastrointestinal Stromal Tumors: Frequency, Spectrum and In Vitro Sensitivity to Imatinib.
C. L. Corless, A. Schroeder, D. Griffith, A. Town, L. McGreevey, P. Harrell, S. Shiraga, T. Bainbridge, J. Morich, and M. C. Heinrich (2005)
J. Clin. Oncol. 23, 5357-5364
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A Knock-In Mouse Model of Gastrointestinal Stromal Tumor Harboring Kit K641E.
B. P. Rubin, C. R. Antonescu, J. P. Scott-Browne, M. L. Comstock, Y. Gu, M. R. Tanas, C. B. Ware, and J. Woodell (2005)
Cancer Res. 65, 6631-6639
   Abstract »    Full Text »    PDF »
Temporal quantitation of mutant Kit tyrosine kinase signaling attenuated by a novel thiophene kinase inhibitor OSI-930.
F. Petti, A. Thelemann, J. Kahler, S. McCormack, L. Castaldo, T. Hunt, L. Nuwaysir, L. Zeiske, H. Haack, L. Sullivan, et al. (2005)
Mol. Cancer Ther. 4, 1186-1197
   Abstract »    Full Text »    PDF »
Introduction to a Cancer Symposium for the Practitioner.
A. Tefferi, S. V. Rajkumar, and A. A. Adjei (2005)
Mayo Clin. Proc. 80, 1085-1086
   PDF »
Tyrosine Kinases as Targets for Cancer Therapy.
D. S. Krause and R. A. Van Etten (2005)
N. Engl. J. Med. 353, 172-187
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Homozygous Deletions and Chromosome Amplifications in Human Lung Carcinomas Revealed by Single Nucleotide Polymorphism Array Analysis.
X. Zhao, B. A. Weir, T. LaFramboise, M. Lin, R. Beroukhim, L. Garraway, J. Beheshti, J. C. Lee, K. Naoki, W. G. Richards, et al. (2005)
Cancer Res. 65, 5561-5570
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The location of KIT and PDGFRA gene mutations in gastrointestinal stromal tumours is site and phenotype associated.
R Penzel, S Aulmann, M Moock, M Schwarzbach, R J Rieker, and G Mechtersheimer (2005)
J. Clin. Pathol. 58, 634-639
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Acquired Resistance to Imatinib in Gastrointestinal Stromal Tumor Occurs Through Secondary Gene Mutation.
C. R. Antonescu, P. Besmer, T. Guo, K. Arkun, G. Hom, B. Koryotowski, M. A. Leversha, P. D. Jeffrey, D. Desantis, S. Singer, et al. (2005)
Clin. Cancer Res. 11, 4182-4190
   Abstract »    Full Text »    PDF »
Mapping Molecular Networks Using Proteomics: A Vision for Patient-Tailored Combination Therapy.
E. F. Petricoin III, V. E. Bichsel, V. S. Calvert, V. Espina, M. Winters, L. Young, C. Belluco, B. J. Trock, M. Lippman, D. A. Fishman, et al. (2005)
J. Clin. Oncol. 23, 3614-3621
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Analysis of KIT Mutations in Sporadic and Familial Gastrointestinal Stromal Tumors: Therapeutic Implications through Protein Modeling.
C. Tarn, E. Merkel, A. A. Canutescu, W. Shen, Y. Skorobogatko, M. J. Heslin, B. Eisenberg, R. Birbe, A. Patchefsky, R. Dunbrack, et al. (2005)
Clin. Cancer Res. 11, 3668-3677
   Abstract »    Full Text »    PDF »
Autocrine- and paracrine-activated receptor tyrosine kinases in classic Hodgkin lymphoma.
C. Renne, K. Willenbrock, R. Kuppers, M.-L. Hansmann, and A. Brauninger (2005)
Blood 105, 4051-4059
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KIT-positive Gastrointestinal Stromal Tumor in a 22-year-old Male Chimpanzee (Pan troglodites).
G. A. Saturday, J. Lasota, D. Frost, K. B. Brasky, G. Hubbard, and M. Miettinen (2005)
Vet. Pathol. 42, 362-365
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Familial Gastrointestinal Stromal Tumor Syndrome: Phenotypic and Molecular Features in a Kindred.
F. P. Li, J. A. Fletcher, M. C. Heinrich, J. E. Garber, S. E. Sallan, C. Curiel-Lewandrowski, A. Duensing, M. van de Rijn, L. E. Schnipper, and G. D. Demetri (2005)
J. Clin. Oncol. 23, 2735-2743
   Abstract »    Full Text »    PDF »
Sequential Blockade of Oncogenic Kinases.
R. Chen and W. Plunkett (2005)
Am. Assoc. Cancer Res. Educ. Book 2005, 344-348
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Targeting the platelet-derived growth factor receptor {alpha} with a neutralizing human monoclonal antibody inhibits the growth of tumor xenografts: Implications as a potential therapeutic target.
N. Loizos, Y. Xu, J. Huber, M. Liu, D. Lu, B. Finnerty, R. Rolser, A. Malikzay, A. Persaud, E. Corcoran, et al. (2005)
Mol. Cancer Ther. 4, 369-379
   Abstract »    Full Text »    PDF »

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