Related Content
Search Google Scholar for:
|
Science 307 (5709): 596-600
Copyright © 2005 by the American Association for the Advancement of Science
Small CTD Phosphatases Function in Silencing Neuronal Gene Expression
Michele Yeo,1*
Soo-Kyung Lee,2*
Bora Lee,2
Esmeralda C. Ruiz,2
Samuel L. Pfaff,2
Gordon N. Gill1
Abstract:
Neuronal gene transcription is repressed in non-neuronal cells by the repressor element 1 (RE-1)silencing transcription factor/neuron-restrictive silencer factor (REST/NRSF) complex. To understand how this silencing is achieved, we examined a family of class-C RNA polymerase II (RNAPII) carboxyl-terminal domain (CTD) phosphatases [small CTD phosphatases (SCPs) 1 to 3], whose expression is restricted to non-neuronal tissues. We show that REST/NRSF recruits SCPs to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells. Phosphatase-inactive forms of SCP interfere with REST/NRSF function and promote neuronal differentiation of P19 stem cells. Likewise, small interfering RNA directed to the single Drosophila SCP unmasks neuronal gene expression in S2 cells. Thus, SCP activity is an evolutionarily conserved transcriptional regulator that acts globally to silence neuronal genes.
1 Department of Medicine, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA.
2 The Gene Expression Laboratory, Salk Institute, La Jolla, CA 92037, USA.
* These two authors contributed equally to this work.
Present address: Neurology Division, Duke University Medical Center, Durham, NC 27710, USA.
Present address: Department of Molecular and Cellular Biology, Huffington Center on Aging, Baylor College of Medicine, One Baylor Plaza, Room 132C, Houston, TX 77030, USA.
To whom correspondence should be addressed. E-mail: ggill{at}ucsd.edu
THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
- EWS and RE1-Silencing Transcription Factor Inhibit Neuronal Phenotype Development and Oncogenic Transformation in Ewing Sarcoma.
- S. Sankar, N. C. Gomez, R. Bell, M. Patel, I. J. Davis, S. L. Lessnick, and W. Luo (2013)
Genes & Cancer
| Abstract »
| Full Text »
| PDF »
- The RNA polymerase II CTD coordinates transcription and RNA processing.
- J.-P. Hsin and J. L. Manley (2012)
Genes & Dev.
26, 2119-2137
| Abstract »
| Full Text »
| PDF »
- MicroRNA-26a/b and their host genes cooperate to inhibit the G1/S transition by activating the pRb protein.
- Y. Zhu, Y. Lu, Q. Zhang, J.-J. Liu, T.-J. Li, J.-R. Yang, C. Zeng, and S.-M. Zhuang (2012)
Nucleic Acids Res.
40, 4615-4625
| Abstract »
| Full Text »
| PDF »
- Huntingtin Aggregation Kinetics and Their Pathological Role in a Drosophila Huntington's Disease Model.
- K. R. Weiss, Y. Kimura, W.-C. M. Lee, and J. T. Littleton (2012)
Genetics
190, 581-600
| Abstract »
| Full Text »
| PDF »
- The enemy within: intronic miR-26b represses its host gene, ctdsp2, to regulate neurogenesis.
- J. Han, A. M. Denli, and F. H. Gage (2012)
Genes & Dev.
26, 6-10
| Abstract »
| Full Text »
| PDF »
- Intronic miR-26b controls neuronal differentiation by repressing its host transcript, ctdsp2.
- H. Dill, B. Linder, A. Fehr, and U. Fischer (2012)
Genes & Dev.
26, 25-30
| Abstract »
| Full Text »
| PDF »
- miR-124 function during Ciona intestinalis neuronal development includes extensive interaction with the Notch signaling pathway.
- J. S. Chen, M. S. Pedro, and R. W. Zeller (2011)
Development
138, 4943-4953
| Abstract »
| Full Text »
| PDF »
- UBLCP1 is a 26S proteasome phosphatase that regulates nuclear proteasome activity.
- X. Guo, J. L. Engel, J. Xiao, V. S. Tagliabracci, X. Wang, L. Huang, and J. E. Dixon (2011)
PNAS
108, 18649-18654
| Abstract »
| Full Text »
| PDF »
- Coassembly of REST and its cofactors at sites of gene repression in embryonic stem cells.
- H.-B. Yu, R. Johnson, G. Kunarso, and L. W. Stanton (2011)
Genome Res.
21, 1284-1293
| Abstract »
| Full Text »
| PDF »
- Suppression of BMP-Smad Signaling Axis-Induced Osteoblastic Differentiation by Small C-terminal Domain Phosphatase 1, a Smad Phosphatase.
- S. Kokabu, S. Ohte, H. Sasanuma, M. Shin, K. Yoneyama, E. Murata, K. Kanomata, J. Nojima, Y. Ono, T. Yoda, et al. (2011)
Mol. Endocrinol.
25, 474-481
| Abstract »
| Full Text »
| PDF »
- Corepressor for element-1-silencing transcription factor preferentially mediates gene networks underlying neural stem cell fate decisions.
- J. J. Abrajano, I. A. Qureshi, S. Gokhan, A. E. Molero, D. Zheng, A. Bergman, and M. F. Mehler (2010)
PNAS
107, 16685-16690
| Abstract »
| Full Text »
| PDF »
- Novel Repression of Kcc2 Transcription by REST-RE-1 Controls Developmental Switch in Neuronal Chloride.
- M. Yeo, K. Berglund, G. Augustine, and W. Liedtke (2009)
J. Neurosci.
29, 14652-14662
| Abstract »
| Full Text »
| PDF »
- Targeting Protein Serine/Threonine Phosphatases for Drug Development.
- J. L. McConnell and B. E. Wadzinski (2009)
Mol. Pharmacol.
75, 1249-1261
| Abstract »
| Full Text »
| PDF »
- PP2A regulates BMP signalling by interacting with BMP receptor complexes and by dephosphorylating both the C-terminus and the linker region of Smad1.
- L. Bengtsson, R. Schwappacher, M. Roth, J. H. Boergermann, S. Hassel, and P. Knaus (2009)
J. Cell Sci.
122, 1248-1257
| Abstract »
| Full Text »
| PDF »
- Small C-terminal Domain Phosphatase Enhances Snail Activity through Dephosphorylation.
- Y. Wu, B. M. Evers, and B. P. Zhou (2009)
J. Biol. Chem.
284, 640-648
| Abstract »
| Full Text »
| PDF »
- A Novel Protein Phosphatase is a Binding Partner for the Protein Kinase Domains of UNC-89 (Obscurin) in Caenorhabditis elegans.
- H. Qadota, L. A. McGaha, K. B. Mercer, T. J. Stark, T. M. Ferrara, and G. M. Benian (2008)
Mol. Biol. Cell
19, 2424-2432
| Abstract »
| Full Text »
| PDF »
- Regulation of Tryptophan Hydroxylase-2 Gene Expression by a Bipartite RE-1 Silencer of Transcription/Neuron restrictive Silencing Factor (REST/NRSF) Binding Motif.
- P. D. Patel, D. A. Bochar, D. L. Turner, F. Meng, H. M. Mueller, and C. G. Pontrello (2007)
J. Biol. Chem.
282, 26717-26724
| Abstract »
| Full Text »
| PDF »
- Transgene-Induced Silencing of the Zoosporogenesis-Specific NIFC Gene Cluster of Phytophthora infestans Involves Chromatin Alterations.
- H. S. Judelson and S. Tani (2007)
Eukaryot. Cell
6, 1200-1209
| Abstract »
| Full Text »
| PDF »
- Genome-Wide Mapping of in Vivo Protein-DNA Interactions.
- D. S. Johnson, A. Mortazavi, R. M. Myers, and B. Wold (2007)
Science
316, 1497-1502
| Abstract »
| Full Text »
| PDF »
- The Repressor Element 1-Silencing Transcription Factor Regulates Heart-Specific Gene Expression Using Multiple Chromatin-Modifying Complexes.
- A. J. Bingham, L. Ooi, L. Kozera, E. White, and I. C. Wood (2007)
Mol. Cell. Biol.
27, 4082-4092
| Abstract »
| Full Text »
| PDF »
- A conserved phosphatase cascade that regulates nuclear membrane biogenesis.
- Y. Kim, M. S. Gentry, T. E. Harris, S. E. Wiley, J. C. Lawrence Jr, and J. E. Dixon (2007)
PNAS
104, 6596-6601
| Abstract »
| Full Text »
| PDF »
- The microRNA miR-124 antagonizes the anti-neural REST/SCP1 pathway during embryonic CNS development.
- J. Visvanathan, S. Lee, B. Lee, J. W. Lee, and S.-K. Lee (2007)
Genes & Dev.
21, 744-749
| Abstract »
| Full Text »
| PDF »
- Dephosphorylation of the Linker Regions of Smad1 and Smad2/3 by Small C-terminal Domain Phosphatases Has Distinct Outcomes for Bone Morphogenetic Protein and Transforming Growth Factor-beta Pathways.
- G. Sapkota, M. Knockaert, C. Alarcon, E. Montalvo, A. H. Brivanlou, and J. Massague (2006)
J. Biol. Chem.
281, 40412-40419
| Abstract »
| Full Text »
| PDF »
- Small C-terminal Domain Phosphatases Dephosphorylate the Regulatory Linker Regions of Smad2 and Smad3 to Enhance Transforming Growth Factor-beta Signaling.
- K. H. Wrighton, D. Willis, J. Long, F. Liu, X. Lin, and X.-H. Feng (2006)
J. Biol. Chem.
281, 38365-38375
| Abstract »
| Full Text »
| PDF »
- Evidence of the neuron-restrictive silencer factor (NRSF) interaction with Sp3 and its synergic repression to the mu opioid receptor (MOR) gene.
- C. S. Kim, H. S. Choi, C. K. Hwang, K. Y. Song, B.-K. Lee, P.-Y. Law, L.-N. Wei, and H. H. Loh (2006)
Nucleic Acids Res.
34, 6392-6403
| Abstract »
| Full Text »
| PDF »
- Comparative genomics modeling of the NRSF/REST repressor network: From single conserved sites to genome-wide repertoire.
- A. Mortazavi, E. C. L. Thompson, S. T. Garcia, R. M. Myers, and B. Wold (2006)
Genome Res.
16, 1208-1221
| Abstract »
| Full Text »
| PDF »
- Arabidopsis Carboxyl-Terminal Domain Phosphatase-Like Isoforms Share Common Catalytic and Interaction Domains But Have Distinct in Planta Functions.
- W. Bang, S. Kim, A. Ueda, M. Vikram, D. Yun, R. A. Bressan, P. M. Hasegawa, J. Bahk, and H. Koiwa (2006)
Plant Physiology
142, 586-594
| Abstract »
| Full Text »
| PDF »
- Unique players in the BMP pathway: Small C-terminal domain phosphatases dephosphorylate Smad1 to attenuate BMP signaling.
- M. Knockaert, G. Sapkota, C. Alarcon, J. Massague, and A. H. Brivanlou (2006)
PNAS
103, 11940-11945
| Abstract »
| Full Text »
| PDF »
- RE-1 silencer of transcription/neural restrictive silencer factor modulates ectodermal patterning during Xenopus development..
- P. Olguin, P. Oteiza, E. Gamboa, J. L. Gomez-Skarmeta, and M. Kukuljan (2006)
J. Neurosci.
26, 2820-2829
| Abstract »
| Full Text »
| PDF »
- The Expression of Endothelial Nitric-oxide Synthase Is Controlled by a Cell-specific Histone Code.
- J. E. Fish, C. C. Matouk, A. Rachlis, S. Lin, S. C. Tai, C. D'Abreo, and P. A. Marsden (2005)
J. Biol. Chem.
280, 24824-24838
| Abstract »
| Full Text »
| PDF »
- A structural perspective of CTD function.
- A. Meinhart, T. Kamenski, S. Hoeppner, S. Baumli, and P. Cramer (2005)
Genes & Dev.
19, 1401-1415
| Abstract »
| Full Text »
| PDF »
|
|