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RAP80 Targets BRCA1 to Specific Ubiquitin Structures at DNA Damage Sites
Bijan Sobhian,1
Genze Shao,2
Dana R. Lilli,2
Aedín C. Culhane,3
Lisa A. Moreau,4
Bing Xia,1
David M. Livingston,1*
Roger A. Greenberg1*
Abstract:
Mutations affecting the BRCT domains of the breast cancerassociatedtumor suppressor BRCA1 disrupt the recruitment of this proteinto DNA double-strand breaks (DSBs). The molecular structuresat DSBs recognized by BRCA1 are presently unknown. We reportthe interaction of the BRCA1 BRCT domain with RAP80, a ubiquitin-bindingprotein. RAP80 targets a complex containing the BRCA1-BARD1(BRCA1-associated ring domain protein 1) E3 ligase and the deubiquitinatingenzyme (DUB) BRCC36 to MDC1-H2AXdependent lysine6- andlysine63-linked ubiquitin polymers at DSBs. These events arerequired for cell cycle checkpoint and repair responses to ionizingradiation, implicating ubiquitin chain recognition and turnoverin the BRCA1-mediated repair of DSBs.
1 Dana-Farber Cancer Institute and Department of Genetics and Department of Medicine, Harvard Medical School, 44 Binney Street, Boston, MA 02115, USA. 2 Department of Cancer Biology and Department of Pathology, Abramson Family Cancer Research Institute, University of Pennsylvania School of Medicine, 421 Curie Boulevard, Philadelphia, PA 191046160, USA. 3 Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, 44 Binney Street, Boston, MA 02115, USA. 4 Department of Radiation Oncology, Dana-Farber Cancer Institute, 44 Binney Street, Boston, MA 02115, USA.
Present address: Department of Cancer Biology and Departmentof Pathology, Abramson Family Cancer Research Institute, Universityof Pennsylvania School of Medicine, 421 Curie Boulevard, Philadelphia,PA 191046160, USA.
* To whom correspondence should be addressed. E-mail: david_livingston{at}dfci.harvard.edu (D.M.L.); rogergr{at}mail.med.upenn.edu (R.A.G.)
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284, 7284-7293
|Abstract »|Full Text »|PDF »
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106, 3166-3171
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29, 1050-1058
|Abstract »|Full Text »|PDF »
Histone Ubiquitination Associates with BRCA1-Dependent DNA Damage Response.
J. Wu, M. S. Y. Huen, L.-Y. Lu, L. Ye, Y. Dou, M. Ljungman, J. Chen, and X. Yu (2009)
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29, 849-860
|Abstract »|Full Text »|PDF »
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H. Nishikawa, W. Wu, A. Koike, R. Kojima, H. Gomi, M. Fukuda, and T. Ohta (2009)
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69, 111-119
|Abstract »|Full Text »|PDF »
Rapid Recruitment of BRCA1 to DNA Double-Strand Breaks Is Dependent on Its Association with Ku80.
L. Wei, L. Lan, Z. Hong, A. Yasui, C. Ishioka, and N. Chiba (2008)
Mol. Cell. Biol.
28, 7380-7393
|Abstract »|Full Text »|PDF »
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N. Crosetto, M. Bienko, R. G. Hibbert, T. Perica, C. Ambrogio, T. Kensche, K. Hofmann, T. K. Sixma, and I. Dikic (2008)
J. Biol. Chem.
283, 35173-35185
|Abstract »|Full Text »|PDF »
Disassembly of MDC1 Foci Is Controlled by Ubiquitin-Proteasome-dependent Degradation.
W. Shi, Z. Ma, H. Willers, K. Akhtar, S. P. Scott, J. Zhang, S. Powell, and J. Zhang (2008)
J. Biol. Chem.
283, 31608-31616
|Abstract »|Full Text »|PDF »
Distinct versus overlapping functions of MDC1 and 53BP1 in DNA damage response and tumorigenesis.
K. Minter-Dykhouse, I. Ward, M. S.Y. Huen, J. Chen, and Z. Lou (2008)
J. Cell Biol.
181, 727-735
|Abstract »|Full Text »|PDF »
{gamma}-H2AX in recognition and signaling of DNA double-strand breaks in the context of chromatin.
A. Kinner, W. Wu, C. Staudt, and G. Iliakis (2008)
Nucleic Acids Res.
36, 5678-5694
|Abstract »|Full Text »|PDF »
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J. Yan, X.-P. Yang, Y.-S. Kim, and A. M. Jetten (2008)
Cancer Res.
68, 4269-4276
|Abstract »|Full Text »|PDF »
Ubc13/Rnf8 ubiquitin ligases control foci formation of the Rap80/Abraxas/Brca1/Brcc36 complex in response to DNA damage.
X. H. Yang and L. Zou (2007)
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104, 20645-20646
|Full Text »|PDF »
Orchestration of the DNA-Damage Response by the RNF8 Ubiquitin Ligase.
N. K. Kolas, J. R. Chapman, S. Nakada, J. Ylanko, R. Chahwan, F. D. Sweeney, S. Panier, M. Mendez, J. Wildenhain, T. M. Thomson, et al. (2007)
Science
318, 1637-1640
|Abstract »|Full Text »|PDF »
DNA Damage-Dependent Acetylation and Ubiquitination of H2AX Enhances Chromatin Dynamics.
T. Ikura, S. Tashiro, A. Kakino, H. Shima, N. Jacob, R. Amunugama, K. Yoder, S. Izumi, I. Kuraoka, K. Tanaka, et al. (2007)
Mol. Cell. Biol.
27, 7028-7040
|Abstract »|Full Text »|PDF »
Activation of BRCA1/BRCA2-Associated Helicase BACH1 Is Required for Timely Progression through S Phase.
Inhibitors of the Proteasome Suppress Homologous DNA Recombination in Mammalian Cells.
Y. Murakawa, E. Sonoda, L. J. Barber, W. Zeng, K. Yokomori, H. Kimura, A. Niimi, A. Lehmann, G. Y. Zhao, H. Hochegger, et al. (2007)
Cancer Res.
67, 8536-8543
|Abstract »|Full Text »|PDF »