Note to users. If you're seeing this message, it means that your browser cannot find this page's style/presentation instructions -- or possibly that you are using a browser that does not support current Web standards. Find out more about why this message is appearing, and what you can do to make your experience of our site the best it can be.
Brian B. Tuch,1,2
Hao Li,1
Alexander D. Johnson1,2*
Abstract:
The gradual modification of transcription circuits over evolutionarytime scales is an important source of the diversity of life.Over the past decade, studies in animals have shown how seeminglysmall molecular changes in gene regulation can have large effectson morphology and physiology and how selective pressures canact on these changes. More recently, genome-wide studies, particularlythose in single-cell yeasts, have uncovered evidence of extensivetranscriptional rewiring, indicating that even closely relatedorganisms regulate their genes using markedly different circuitries.
1 Department of Biochemistry and Biophysics, University of California, San Francisco, CA, USA. 2 Department of Microbiology and Immunology, University of California, San Francisco, CA, USA.
* To whom correspondence should be addressed. E-mail: ajohnson{at}cgl.ucsf.edu
The editors suggest the following Related Resources on Science sites:
In Science Magazine
INTRODUCTION TO SPECIAL ISSUE
Guy Riddihough, Beverly A. Purnell, and John Travis (28 March 2008) Science319 (5871), 1781.
[DOI: 10.1126/science.319.5871.1781] |Summary »|PDF »
THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
Multiple Genomic Changes Associated with Reorganization of Gene Regulation and Adaptation in Yeast.
L. David, Y. Ben-Harosh, E. Stolovicki, L. S. Moore, M. Nguyen, R. Tamse, J. Dean, E. Mancera, L. M. Steinmetz, and E. Braun (2013)
Mol. Biol. Evol.
|Abstract »|Full Text »|PDF »
Promoter propagation in prokaryotes.
M. Matus-Garcia, H. Nijveen, and M. W. J. van Passel (2012)
Nucleic Acids Res.
40, 10032-10040
|Abstract »|Full Text »|PDF »
Why Transcription Factor Binding Sites Are Ten Nucleotides Long.
A. J. Stewart, S. Hannenhalli, and J. B. Plotkin (2012)
Genetics
192, 973-985
|Abstract »|Full Text »|PDF »
Thousands of Cis-Regulatory Sequence Combinations Are Shared by Arabidopsis and Poplar.
Cdk2-dependent phosphorylation of p21 regulates the role of Cdk2 in cisplatin cytotoxicity.
R. Hodeify, A. Tarcsafalvi, J. Megyesi, R. L. Safirstein, and P. M. Price (2011)
Am J Physiol Renal Physiol
300, F1171-F1179
|Abstract »|Full Text »|PDF »
Is Transcription Factor Binding Site Turnover a Sufficient Explanation for Cis-Regulatory Sequence Divergence?.
Gene duplication and the evolution of ribosomal protein gene regulation in yeast.
I. Wapinski, J. Pfiffner, C. French, A. Socha, D. A. Thompson, and A. Regev (2010)
PNAS
107, 5505-5510
|Abstract »|Full Text »|PDF »
NFIL3 and cAMP Response Element-Binding Protein Form a Transcriptional Feedforward Loop that Controls Neuronal Regeneration-Associated Gene Expression.
H. D. MacGillavry, F. J. Stam, M. M. Sassen, L. Kegel, W. T. J. Hendriks, J. Verhaagen, A. B. Smit, and R. E. van Kesteren (2009)
J. Neurosci.
29, 15542-15550
|Abstract »|Full Text »|PDF »
Global Analysis of Cdk1 Substrate Phosphorylation Sites Provides Insights into Evolution.
L. J. Holt, B. B. Tuch, J. Villen, A. D. Johnson, S. P. Gygi, and D. O. Morgan (2009)
Science
325, 1682-1686
|Abstract »|Full Text »|PDF »
Dampened Hedgehog signaling but normal Wnt signaling in zebrafish without cilia.