Note to users. If you're seeing this message, it means that your browser cannot find this page's style/presentation instructions -- or possibly that you are using a browser that does not support current Web standards. Find out more about why this message is appearing, and what you can do to make your experience of our site the best it can be.


Logo for

Science 320 (5880): 1185-1190

Copyright © 2008 by the American Association for the Advancement of Science

Widespread Translational Inhibition by Plant miRNAs and siRNAs

Peter Brodersen,1 Lali Sakvarelidze-Achard,1 Marianne Bruun-Rasmussen,1 Patrice Dunoyer,1 Yoshiharu Y. Yamamoto,2 Leslie Sieburth,3 Olivier Voinnet1*

Abstract: High complementarity between plant microRNAs (miRNAs) and their messenger RNA targets is thought to cause silencing, prevalently by endonucleolytic cleavage. We have isolated Arabidopsis mutants defective in miRNA action. Their analysis provides evidence that plant miRNA–guided silencing has a widespread translational inhibitory component that is genetically separable from endonucleolytic cleavage. We further show that the same is true of silencing mediated by small interfering RNA (siRNA) populations. Translational repression is effected in part by the ARGONAUTE proteins AGO1 and AGO10. It also requires the activity of the microtubule-severing enzyme katanin, implicating cytoskeleton dynamics in miRNA action, as recently suggested from animal studies. Also as in animals, the decapping component VARICOSE (VCS)/Ge-1 is required for translational repression by miRNAs, which suggests that the underlying mechanisms in the two kingdoms are related.

1 Institut de Biologie Moléculaire des Plantes du CNRS, Unité Propre de Recherche 2357, 12 rue du Général Zimmer, 67084 Strasbourg Cedex, France.
2 Center for Gene Research, Nagoya University, Furo-cho, Chikusa-ku, Nagoya Aichi, 464-8602, Japan.
3 Department of Biology, University of Utah, Salt Lake City, UT84112, USA.

* To whom correspondence should be addressed. E-mail: olivier.voinnet{at}ibmp-ulp.u-strasbg.fr


THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
Profiling translatomes of discrete cell populations resolves altered cellular priorities during hypoxia in Arabidopsis.
A. Mustroph, M. E. Zanetti, C. J. H. Jang, H. E. Holtan, P. P. Repetti, D. W. Galbraith, T. Girke, and J. Bailey-Serres (2009)
PNAS 106, 18843-18848
   Abstract »    Full Text »    PDF »
Deciphering the diversity of small RNAs in plants: the long and short of it.
F. Schwach, S. Moxon, V. Moulton, and T. Dalmay (2009)
Brief Funct Genomic Proteomic 8, 472-481
   Abstract »    Full Text »    PDF »
Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis.
D. Moldovan, A. Spriggs, J. Yang, B. J. Pogson, E. S. Dennis, and I. W. Wilson (2009)
J. Exp. Bot.
   Abstract »    Full Text »    PDF »
Graft-transmissible induction of potato tuberization by the microRNA miR172.
A. Martin, H. Adam, M. Diaz-Mendoza, M. Zurczak, N. D. Gonzalez-Schain, and P. Suarez-Lopez (2009)
Development 136, 2873-2881
   Abstract »    Full Text »    PDF »
Signals and prepatterns: new insights into organ polarity in plants.
A. Y. Husbands, D. H. Chitwood, Y. Plavskin, and M. C.P. Timmermans (2009)
Genes & Dev. 23, 1986-1997
   Abstract »    Full Text »    PDF »
Transcriptome Analyses Revealed Diverse Expression Changes in ago1 and hyl1 Arabidopsis Mutants.
Y. Kurihara, E. Kaminuma, A. Matsui, M. Kawashima, M. Tanaka, T. Morosawa, J. Ishida, Y. Mochizuki, K. Shinozaki, T. Toyoda, et al. (2009)
Plant Cell Physiol. 50, 1715-1720
   Abstract »    Full Text »    PDF »
Genome-Wide Medicago truncatula Small RNA Analysis Revealed Novel MicroRNAs and Isoforms Differentially Regulated in Roots and Nodules.
C. Lelandais-Briere, L. Naya, E. Sallet, F. Calenge, F. Frugier, C. Hartmann, J. Gouzy, and M. Crespi (2009)
PLANT CELL 21, 2780-2796
   Abstract »    Full Text »    PDF »
Analysis of Post-transcriptional Regulations by a Functional, Integrated, and Quantitative Method.
B. Laloo, D. Simon, V. Veillat, D. Lauzel, V. Guyonnet-Duperat, F. Moreau-Gaudry, F. Sagliocco, and C. Grosset (2009)
Mol. Cell. Proteomics 8, 1777-1788
   Abstract »    Full Text »    PDF »
Defining the Functional Network of Epigenetic Regulators in Arabidopsis thaliana.
C. Luo, B. G. Durgin, N. Watanabe, and E. Lam (2009)
Mol Plant 2, 661-674
   Abstract »    Full Text »    PDF »
Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana.
L. Alves-Junior, S. Niemeier, A. Hauenschild, M. Rehmsmeier, and T. Merkle (2009)
Nucleic Acids Res. 37, 4010-4021
   Abstract »    Full Text »    PDF »
Identification of Nutrient-Responsive Arabidopsis and Rapeseed MicroRNAs by Comprehensive Real-Time Polymerase Chain Reaction Profiling and Small RNA Sequencing.
B. D. Pant, M. Musialak-Lange, P. Nuc, P. May, A. Buhtz, J. Kehr, D. Walther, and W.-R. Scheible (2009)
Plant Physiology 150, 1541-1555
   Abstract »    Full Text »    PDF »
Small RNA analysis in Petunia hybrida identifies unusual tissue-specific expression patterns of conserved miRNAs and of a 24mer RNA.
P. Tedder, E. Zubko, D. R. Westhead, and P. Meyer (2009)
RNA 15, 1012-1020
   Abstract »    Full Text »    PDF »
Biochemical Evidence for Translational Repression by Arabidopsis MicroRNAs.
E. Lanet, E. Delannoy, R. Sormani, M. Floris, P. Brodersen, P. Crete, O. Voinnet, and C. Robaglia (2009)
PLANT CELL 21, 1762-1768
   Abstract »    Full Text »    PDF »
Investigating Translational Repression by MicroRNAs in Arabidopsis.
N. A. Eckardt (2009)
PLANT CELL 21, 1624
   Full Text »    PDF »
Gene structures and processing of Arabidopsis thaliana HYL1-dependent pri-miRNAs.
B. Szarzynska, L. Sobkowiak, B. D. Pant, S. Balazadeh, W.-R. Scheible, B. Mueller-Roeber, A. Jarmolowski, and Z. Szweykowska-Kulinska (2009)
Nucleic Acids Res. 37, 3083-3093
   Abstract »    Full Text »    PDF »
Web-Queryable Large-Scale Data Sets for Hypothesis Generation in Plant Biology.
S. M. Brady and N. J. Provart (2009)
PLANT CELL 21, 1034-1051
   Abstract »    Full Text »    PDF »
Cyclophilin 40 is required for microRNA activity in Arabidopsis.
M. R. Smith, M. R. Willmann, G. Wu, T. Z. Berardini, B. Moller, D. Weijers, and R. S. Poethig (2009)
PNAS 106, 5424-5429
   Abstract »    Full Text »    PDF »
The more and smaller cells mutants of Arabidopsis thaliana identify novel roles for SQUAMOSA PROMOTER BINDING PROTEIN-LIKE genes in the control of heteroblasty.
T. Usami, G. Horiguchi, S. Yano, and H. Tsukaya (2009)
Development 136, 955-964
   Abstract »    Full Text »    PDF »
Identification of microRNA regulatory modules in Arabidopsis via a probabilistic graphical model.
J.-G. Joung and Z. Fei (2009)
Bioinformatics 25, 387-393
   Abstract »    Full Text »    PDF »
Establishing RNA Interference as a Reverse-Genetic Approach for Gene Functional Analysis in Protoplasts.
Z. Zhai, T. Sooksa-nguan, and O. K. Vatamaniuk (2009)
Plant Physiology 149, 642-652
   Abstract »    Full Text »    PDF »
HIV-1 Tat RNA silencing suppressor activity is conserved across kingdoms and counteracts translational repression of HIV-1.
S. Qian, X. Zhong, L. Yu, B. Ding, P. de Haan, and K. Boris-Lawrie (2009)
PNAS 106, 605-610
   Abstract »    Full Text »    PDF »
Differential expression of miRNAs in response to salt stress in maize roots.
D. Ding, L. Zhang, H. Wang, Z. Liu, Z. Zhang, and Y. Zheng (2009)
Ann. Bot. 103, 29-38
   Abstract »    Full Text »    PDF »
Katanin Knockdown Supports a Role for Microtubule Severing in Release of Basal Bodies before Mitosis in Chlamydomonas.
M. Q. Rasi, J. D.K. Parker, J. L. Feldman, W. F. Marshall, and L. M. Quarmby (2009)
Mol. Biol. Cell 20, 379-388
   Abstract »    Full Text »    PDF »
De Novo Organ Formation from Differentiated Cells: Root Nodule Organogenesis.
M. Crespi and F. Frugier (2008)
Science Signaling 1, re11
   Abstract »    Full Text »    PDF »
Evolution of Arabidopsis MIR genes generates novel microRNA classes.
F. Vazquez, T. Blevins, J. Ailhas, T. Boller, and F. Meins Jr (2008)
Nucleic Acids Res. 36, 6429-6438
   Abstract »    Full Text »    PDF »
Transcriptome-Wide Analysis of Uncapped mRNAs in Arabidopsis Reveals Regulation of mRNA Degradation.
Y. Jiao, J. L. Riechmann, and E. M. Meyerowitz (2008)
PLANT CELL 20, 2571-2585
   Abstract »    Full Text »    PDF »
Specific Gene Silencing by Artificial MicroRNAs in Physcomitrella patens: An Alternative to Targeted Gene Knockouts.
B. Khraiwesh, S. Ossowski, D. Weigel, R. Reski, and W. Frank (2008)
Plant Physiology 148, 684-693
   Abstract »    Full Text »    PDF »
Vascular signalling mediated by ZWILLE potentiates WUSCHEL function during shoot meristem stem cell development in the Arabidopsis embryo.
M. R. Tucker, A. Hinze, E. J. Tucker, S. Takada, G. Jurgens, and T. Laux (2008)
Development 135, 2839-2843
   Abstract »    Full Text »    PDF »
Suppression of the MicroRNA Pathway by Bacterial Effector Proteins.
L. Navarro, F. Jay, K. Nomura, S. Y. He, and O. Voinnet (2008)
Science 321, 964-967
   Abstract »    Full Text »    PDF »

To Advertise     Find Products


Science Signaling. ISSN 1937-9145 (online), 1945-0877 (print). Pre-2008: Science's STKE. ISSN 1525-8882